Job Description P26646 Confidence 100.00% Date Thu Jan 5 11:43:02 GMT 2012 Rank 5 Aligned Residues 306 % Identity 22% Template c4a10A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp. Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10											.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	A	L	L	L	E	Q	Q	D	.	.	.	.	.	.	.	.	.	.	G	K	.	T	L	A	S	V	Q	T	L	D	E	S	R	L	P	E	G	D	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	A	L	H	L	R	A	E	D	A	D	M	F	K	G	V	A	D	K	D	V	R	K	S	L	R	L	G	E	V	P	M	P	E	L	A	P	D	E	V	L	V	A	V	M	A	S	S	I	N	Y	N	T	V	W	S	A	M	F	E	P	I	P	T	F	H	F	L	K	Q	N	A	R	Q	G	G	W	A	T
Template Known Secondary structure									G	G	G	T	T	T	T	T	T		S	S																			T	T																				T	T		S	S											T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
				55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																						.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	R	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	T	S	E	.	.	D	P	R	F	H	A	G	Q	E	V	L	L	T	G	W	G	V	G	E	N	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	A	E	Q	A	R	V	K	G	D	W	L
Query Conservation		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	H	D	Q	P	Y	H	V	L	G	S	D	C	S	G	V	V	V	R	T	G	I	G	V	R	R	W	K	P	G	D	H	V	I	V	H	P	A	H	V	D	E	Q	E	P	A	T	H	G	D	G	M	L	G	T	E	Q	R	A	W	G	F	E	T	N	F	G	G	L	A	E	Y	G	V	V	R	A	S	Q	L
Template Known Secondary structure		G	G			S						S											T	T			S			T	T							S					T	T	S	G	G	G	G	T		T	T		S	T	T				T	T	T	T	S	S	S		S	S	B	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	M	P	Q	G	L	D	A	R	K	A	M	I	I	G	T	A	G	F	T	A	M	L	C	V	M	A	L	E	D	A	G	V	R	P	Q	D	G	E	I	V	V	T	G	A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		L	P	K	P	A	H	L	T	W	E	E	A	A	V	S	P	L	C	A	G	T	A	Y	R	M	L	V	S	.	D	R	G	A	Q	M	K	Q	G	D	I	V	L	I	W	G	A	S	G	G	L	G	S	Y	A	I	Q	F	V	K	N	G	G	G	I	P	V	A	V	V	S	S	A	Q	K	E	A	A	V	R	A
Template Known Secondary structure						T	T	S							T	S												T	S	.	T	T	T	T				T	T						T	T	T	T	S													T	T								S	S
Template Predicted Secondary structure																														.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	S	R	V	L	P	R	D	E	F	A	E	S	R	P	.	.	.	.	.	.	.	.	.	.	.	L	E	K	Q	V	W	A	G	A	I	D	T	V	G	D	K	V	L	A	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	F	T	L	P	T	T	V	M	P	F	I	L	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	C	D	L	V	I	N	R	A	E	L	R	R	V	V	E	T	G	R	K	L	A	K	L	V	V	E	K	A	G	R	E	P	D	I	V	F	E	H	T	G	R	V	T	F	G	L	S	V	I	V	A	R	R	G	G	T	V	V	T	C	N	.	.	.	.	.	.	.	.	.	.	.	R	Y	L	W	M	K
Template Known Secondary structure		T	T							T	T																					S	S			S						S		S	T									S		T	T								.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.												.	.	.	330	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	V	R	L	Q	G	V	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V	A	D	L	P	E	S	.	F	Y	T	Q	A	A	K	E	I	S	L	S	E	A	P	N	F	A	E	A	I	I	N	N	Q	I	Q	G	R	T	L	V	K	V	N
Query Conservation																																	.
Alig confidence													.	.	.	.	.	.															.
Template Conservation													.	.	.	.	.	.
Template Sequence		L	K	K	I	V	G	S	H	G	A	N	.	.	.	.	.	.	H	E	E	Q	Q	A	T	N	R	L	F	E	S	G	A	V	V	P	A	M	S	A	V	Y	P	L	A	E	A	A	E	A	C	R	V	V	Q	T	S	R	Q	V	G	K	V	A	V	L	C	M
Template Known Secondary structure		T								S			.	.	.	.	.	.													T	T	S	S										G	G	G										T	T		B	S	S						S	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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