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Job DescriptionP26646
Confidence75.52%DateThu Jan 5 11:43:02 GMT 2012
Rank161Aligned Residues97
% Identity9%Templatec3ocjA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis
Resolution1.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180....... ..190.........200.........210.........
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Query Sequence  RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL. . . . KSLGASRVLPRDEFAESRPLEKQVWAGAIDTV
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Template Sequence  LRPGCVVASVPCGWXSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG
Template Known Secondary structure 

TT
TT
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TTSTTGGG

GGG



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S
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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   220. ........230.........240
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Query Sequence  GD. . . . . . . . . . KVLAKVLAQMNYGGCVAAC
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Template Sequence  LNIYEPDDARVTELYRRFWQALKPGGALVTS
Template Known Secondary structure  SGGG


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   193......200.........210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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