Return to main results Retrieve Phyre Job Id

Job DescriptionP26646
Confidence40.04%DateThu Jan 5 11:43:02 GMT 2012
Rank366Aligned Residues94
% Identity16%Templatec3mtiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190 .........200.........210.......
Predicted Secondary structure 
















......











Query SS confidence 














































. . . . . .


























Query Sequence  RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL. . . . . . GASRVLPRDEFAESRPLEKQVWAGAID
Query Conservation        
                                        ......
   

                     
Alig confidence 



















...























......


























Template Conservation 
  
  


 
 
 
  
  ...

     
  

 
   
  
                              
 

  
Template Sequence  LDDESIVVDATXGNGNDTAF. . . LAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN
Template Known Secondary structure 

TT
S

TTS...TTSSS
T


S
GGGGGGT

S
Template Predicted Secondary structure 









...
























Template SS confidence 















































































   17..20.........30...... ...40.........50.........60.........70.........80.........90...
 
   218.220. ........230.........240
Predicted Secondary structure 

....




Query SS confidence 



. . . .


















Query Sequence  TVGD. . . . KVLAKVLAQMNYGGCVAAC
Query Conservation      ....             
  
  
Alig confidence 



....


















Template Conservation 
         
      




 
 
 
Template Sequence  LGKPHTTLEAIEKILDRLEVGGRLAIX
Template Known Secondary structure 

Template Predicted Secondary structure 









Template SS confidence 


























   94.....100.........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions