 |
Job Description | P26646 | Confidence | 74.29% | Date | Thu Jan 5 11:43:02 GMT 2012 |
Rank | 165 | Aligned Residues | 109 |
% Identity | 14% | Template | c3lbfC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:protein-l-isoaspartate o-methyltransferase; |
PDBTitle: crystal structure of protein l-isoaspartyl methyltransferase from2 escherichia coli
|
Resolution | 1.80 Å |
|
 |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | T | A | M | L | C | V | M | A | L | E | D | A | G | V | R | P | Q | D | G | E | I | V | V | T | G | A | S | G | G | V | G | S | T | A | V | A | L | L | H | K | L | G | Y | Q | V | V | A | V | S | G | R | E | S | T | H | E | Y | L | K | S | L | . |
. |
. |
. |
. |
G | A | S | R | V | L | P | R | D | E | F | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
|   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |
|   |
|   |   |   |   | . | . | . |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
I | S | Q | P | Y | M | V | A | R | M | T | E | L | L | E | L | T | P | Q | S | R | V | L | E | I | G | T | G | S | G | Y | Q | T | A | . |
. |
. |
I | L | A | H | L | V | Q | H | V | C | S | V | E | R | I | K | G | L | Q | W | Q | A | R | R | R | L | K | N | L | D | L | H | N | V | S | T | R | H | G | D | G | W | Q |
Template Known Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  | . | . | . |  |  |  | T | T | S | S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | S |
| G | G | G |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | P | L | E | K | Q | V | W | A | G | A | I | D | T | V | G | D | K | V | L | A | K | V | L | A | Q | M | N | Y | G | G | C | V | A | A | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
G | W | Q | A | R | A | P | F | D | A | I | I | V | T | A | A | P | P | E | I | P | T | A | L | M | T | Q | L | D | E | G | G | I | L | V | L | P |
Template Known Secondary structure |   |
T | T | G | G | G |
|
|  |  |  |  |  |  |
| S | B |
| S | S |
|
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|