Return to main results Retrieve Phyre Job Id

Job DescriptionP26646
Confidence100.00%DateThu Jan 5 11:43:02 GMT 2012
Rank23Aligned Residues316
% Identity17%Templatec3ip1C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.... .....20.... .....30.........40.........
Predicted Secondary structure 






.........................



.






.....
Query SS confidence 













. . . . . . . . . . . . . . . . . . . . . . . . .









.
























. . . . .
Query Sequence  MQALLLEQQDGKTL. . . . . . . . . . . . . . . . . . . . . . . . . ASVQTLDESR. LPEGDVTVDVHWSSLNYKDALAITG. . . . .
Query Conservation 


 
    
 
  .........................
 
   
 
 .    





 
 

   
     
.....
Alig confidence 













.........................









.
























.....
Template Conservation                                         
 
 


 
      





 
 


 

     
     
Template Sequence  LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGY
Template Known Secondary structure 



TT



TT
BTTTBBS
GGGT






STT


B
TTSB
Template Predicted Secondary structure 








































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   50.........60.........70..... ....80.........90.... .....
Predicted Secondary structure  .















........








.....................




Query SS confidence  .

























. . . . . . . .


















. . . . . . . . . . . . . . . . . . . . .




Query Sequence  . KGKIIRNFPMIPGIDFAGTVRTSEDP. . . . . . . . RFHAGQEVLLTGWGVGENH. . . . . . . . . . . . . . . . . . . . . WGGLA
Query Conservation  .        
   
             ........    
  
           .....................     
Alig confidence  .

























........


















.....................




Template Conservation           
 
 


  
 
  

  
     
  
 


 
        
 
  
  
                
  
Template Sequence  ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA
Template Known Secondary structure  BS

S
B
SS



TT
TTTT

TT

S

S
STT
GGG
TT
BTTTB

SSB
Template Predicted Secondary structure 
























































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   100.........110.........120.........130...... ...140.........150.........160.........170.....
Predicted Secondary structure 























....















Query SS confidence 




































. . . .






































Query Sequence  EQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVM. . . . ALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVV
Query Conservation                                       ....             
                         
Alig confidence 




































....






































Template Conservation 

  
       

       
        
                    
  


 
    
  
             
Template Sequence  EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVI
Template Known Secondary structure  SGGG
GGGTTTS
TTTTTTT



TT


STT
S
Template Predicted Secondary structure 


























Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   176...180.........190.........200....... ..210.........220.........230...... ...240......
Predicted Secondary structure 











.....









....





Query SS confidence 































. . . . .




























. . . .









Query Sequence  AVSGRESTHEYLKSLGASRVLPRDEFAESRPL. . . . . EKQVWAGAIDTVGDKVLAKVLAQMNYGGC. . . . VAACGLAGGF
Query Conservation                 
   

           .....                           
 .... 
  
     
Alig confidence 































.....




























....









Template Conservation                                           
 
 
  
               
               
Template Sequence  LSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA
Template Known Secondary structure 
S
T
S
TTTS
TTT


S
SS

S




S


S
Template Predicted Secondary structure 





























Template SS confidence 















































































   241........250.........260.........270.........280.........290.........300.........310.........320
 
   247..250.........260.........270.........280......... 290.........300.........310.........320.
Predicted Secondary structure 











..










Query SS confidence 










































. .































Query Sequence  TLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPES. . FYTQAAKEISLSEAPNFAEAIINNQIQGRTLV
Query Conservation                   
                 
       ..    
     

    
      
   




Alig confidence 























.....













..































Template Conservation                 
 
      .....         
   
      

    


  

          



 
Template Sequence  KIPLTGEVFQVRRAQIVGSQGHSG. . . . . HGTFPRVISLXASGXDXTKIISKTVSXEEIPEYIKRLQTDKSLVKVTX
Template Known Secondary structure 




TT





S.....TTTT

GGGG


GGGTTT
TT
S
Template Predicted Secondary structure 









.....















Template SS confidence 












































































   321........330.........340.... .....350.........360.........370.........380.........390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions