Phyre 2 alignment of P26646 with c2w4qA

Job Description P26646
Confidence 100.00% Date Thu Jan 5 11:43:02 GMT 2012

Rank 48 Aligned Residues 319

% Identity 14% Template c2w4qA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.					.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure									.	.	.	.					.	.														.																																														.	.	.
Query SS confidence									.	.	.	.					.	.														.																																														.	.	.
Query Sequence	M	Q	A	L	L	L	E	Q	.	.	.	.	Q	D	G	K	.	.	T	L	A	S	V	Q	T	L	D	E	S	R	L	.	P	E	G	D	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	R	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	.	.	.
Query Conservation									.	.	.	.					.	.														.																																														.	.	.
Alig confidence									.	.	.	.					.	.														.																																														.	.	.
Template Conservation
Template Sequence	V	Q	R	V	V	L	N	S	R	P	G	K	N	G	N	P	V	A	E	N	F	R	M	E	E	V	Y	L	P	D	N	I	N	E	G	Q	V	Q	V	R	T	L	Y	L	S	V	D	P	Y	M	R	C	R	M	N	E	D	T	G	T	D	Y	I	T	P	W	Q	L	S	Q	V	V	D	G	G	G	I	G	I	I
Template Known Secondary structure												T	T	S				G	G	G										S				T	T													T	T					T	S	S			S	S	T	T	S					B	T	S	B
Template Predicted Secondary structure
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	T	S	E	D	P	R	F	H	A	G	Q	E	V	L	L	T	G	W	G	V	G	E	N	H	W	G	G	L	A	E	Q	A	R	V	K	G	D	W	L	V	A	M	P	Q	G	L	D	A	R	K	A	M	I	I	G	T	A	G	F	T	A	M	L	C	V	M	A	L	E	D	A	G	V	R	P	Q	D	G	E
Query Conservation	.
Alig confidence	.																																																.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence	E	E	S	K	H	T	N	L	T	K	G	D	F	V	T	S	F	Y	W	P	W	Q	T	K	V	I	L	D	G	N	S	L	E	K	V	D	P	Q	L	V	D	G	H	L	S	Y	F	L	.	.	.	.	G	A	I	G	M	P	G	L	T	S	L	I	G	I	Q	E	K	G	H	I	T	A	G	S	N	K	T	M
Template Known Secondary structure					S	T	T			T	T										S	B	S						G	G	G						G	G	G	G	T	T		G	G	G	G	G	.	.	.	.	T	T	T	S														S				T	T
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence	I	V	V	T	G	A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	L	G	A	S	R	V	L	P	R	D	E	F	A	.	.	.	.	E	S	R	P	L	E	K	Q	V	W	A	G	A	I	D	T	V	G	D	K	V	L	A
Query Conservation																																																						.	.	.	.
Alig confidence																																																						.	.	.	.
Template Conservation
Template Sequence	V	V	S	G	A	A	G	A	C	G	S	V	A	G	Q	I	G	H	F	L	G	C	S	R	V	V	G	I	C	G	T	H	E	K	C	I	L	L	T	S	E	L	G	F	D	A	A	I	N	Y	K	K	D	N	V	A	E	Q	L	R	E	S	C	P	A	G	V	D	V	Y	F	D	N	V	G	G	N	I	S	D
Template Known Secondary structure			S	S	T	T	B													T	T		S							S											T	S			S					T	T	T	S											T	T								S	S
Template Predicted Secondary structure
Template SS confidence
	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																													.
Query SS confidence																					.	.	.	.	.	.	.	.	.																																													.
Query Sequence	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	.	.	.	.	.	.	.	.	.	F	T	L	P	T	T	V	M	P	F	I	L	R	N	V	R	L	Q	G	V	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V	A	D	L	P	E	S	.	F	Y	T	Q	A	A
Query Conservation																					.	.	.	.	.	.	.	.	.																																													.
Alig confidence																					.	.	.	.	.	.	.	.	.																									.																				.
Template Conservation																																																						.
Template Sequence	T	V	I	S	Q	M	N	E	N	S	H	I	I	L	C	G	Q	I	S	Q	Y	N	K	D	V	P	Y	P	P	P	L	S	P	A	I	E	A	I	Q	K	E	R	N	I	T	R	E	R	F	L	V	L	N	.	Y	K	D	K	F	E	P	G	I	L	Q	L	S	Q	W	F	K	E	G	K	L	K	I	K	E	T
Template Known Secondary structure				T	T													G	G	G	T	T	S				S	S														T	T								G	G	G	.	G	G	G	G														T	T		S
Template Predicted Secondary structure																																																						.
Template SS confidence
	239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

	296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	E	I	S	L	S	E	A	P	N	F	A	E	A	I	I	N	N	Q	I	Q	G	R	T	L	V	K	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	V	I	N	G	L	E	N	M	G	A	A	F	Q	S	M	M	T	G	G	N	I	G	K	Q	I	V	C	I	S
Template Known Secondary structure					G	G	G										T	T			S	B						S
Template Predicted Secondary structure
Template SS confidence
	318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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