Phyre 2 alignment of P26646 with c2vz8B

Job Description P26646
Confidence 99.77% Date Thu Jan 5 11:43:02 GMT 2012

Rank 82 Aligned Residues 307

% Identity 15% Template c2vz8B_

PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase

Resolution 3.2 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.
Predicted Secondary structure																									.	.	.																																															.	.	.
Query SS confidence																									.	.	.																																															.	.	.
Query Sequence	L	L	L	E	Q	Q	D	G	K	T	L	A	S	V	Q	T	L	D	E	S	R	L	P	E	.	.	.	G	D	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	R	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	T	S	E	.	.	.	D	P	R	F
Query Conservation																									.	.	.																																															.	.	.
Alig confidence																									.	.	.																										.	.	.	.	.																	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence	V	N	V	L	S	R	G	D	L	S	S	I	R	W	V	C	S	P	L	H	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	S	.	.	.	.	.	P	D	S	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	G	R	D
Template Known Secondary structure				S	S	S	S		T	T	S							G	G	G	G				T	T	S	T	T	T																			T	S	S		.	.	.	.	.	G	G	G			S			S		S	S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
	1533	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.						.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.

	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	A	G	Q	E	V	L	L	T	G	W	G	V	G	E	N	H	W	G	G	L	A	E	Q	A	R	V	K	G	D	W	L	V	A	M	P	Q	G	L	D	A	R	K	A	M	I	I	G	T	A	G	F	T	A	M	L	C	V	M	A	L	E	D	A	G	V	R	P	Q	D	G	E	I	V	V	T	G	A	S	G
Query Conservation
Alig confidence										.	.	.	.	.	.																																				.	.	.
Template Conservation										.	.	.	.	.	.																																				.	.	.
Template Sequence	A	S	G	R	R	V	M	G	M	.	.	.	.	.	.	V	P	A	E	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	.	.	.	Y	T	T	A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G
Template Known Secondary structure	T	T								.	.	.	.	.	.		S	S			S	B	S						G	G	G						T	T	S						T	T					.	.	.									T	T	T	T				T	T								S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.																																				.	.	.
Template SS confidence
	1608	.	1610	.	.	.	.	.	.							.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.				.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.

	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																							.	.	.	.
Query SS confidence																																	.	.	.	.																							.	.	.	.
Query Sequence	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	.	.	.	.	L	G	A	S	R	V	L	P	R	D	E	F	A	E	S	R	P	L	E	K	Q	V	.	.	.	.	W	A	G	A	I	D	T	V	G	D	K	V	L	A	K	V	L	A
Query Conservation																																	.	.	.	.																							.	.	.	.
Alig confidence																																	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence	G	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K	G	V	D	L	V	L	N	S	L	A	E	E	K	L	Q	A	S	V	R
Template Known Secondary structure													T	T								S													T	T			S	T	T				S	S	S	S									T	T	T	T																				T
Template Predicted Secondary structure
Template SS confidence
	1679	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.

	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																					.	.	.																									.
Query SS confidence																																					.	.	.																									.
Query Sequence	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	F	T	L	P	T	T	V	M	P	F	I	L	R	N	V	R	L	Q	G	V	.	.	.	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V	A	D	L	P	E	S	.	F	Y	T	Q	A	A	K	E	I	S	L	S	E	A	P	N
Query Conservation																																					.	.	.																									.
Alig confidence																																					.	.	.																									.
Template Conservation
Template Sequence	C	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	T	V	F	P	R	T	K	V	E	A
Template Known Secondary structure	T																	T	T					T	T	G	G	G	G	T								T					T	S																	T	T	T		S										S	S	T
Template Predicted Secondary structure
Template SS confidence
	1759	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.

	306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	A	E	A	I	I	N	N	Q	I	Q	G	R	T	L	V	K	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	A	F	R	Y	M	A	Q	G	K	H	I	G	K	V	V	I	Q	V	R
Template Known Secondary structure							T	T			S	S						S	S
Template Predicted Secondary structure
Template SS confidence
	1839	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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