Job Description P26646 Confidence 28.67% Date Thu Jan 5 11:43:02 GMT 2012 Rank 433 Aligned Residues 87 % Identity 8% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																															.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	L	G	A	S	R	V	L	P	R	D	.	.	E	F	A	E	S	R	P	L	E	K	Q	V	W	A	G	A	I	D	T	V	G	D	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q
Template Known Secondary structure		T		T	T	S											T	T		B						S	B														T	T									S	T	T	T	T			S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
			223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	L	A	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A
Template Known Secondary structure								G	G	G
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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