Job Description P26646 Confidence 100.00% Date Thu Jan 5 11:43:02 GMT 2012 Rank 58 Aligned Residues 289 % Identity 16% Template c2h6eA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																									.																			.
Query SS confidence																																																									.																			.
Query Sequence		M	Q	A	L	L	L	E	Q	Q	D	G	K	T	L	A	S	V	Q	T	L	D	E	S	R	L	P	E	G	D	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	R	.	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	T	S	E	.	D	P	R	F	H
Query Conservation																																																									.																			.
Alig confidence												.	.	.	.	.	.	.																																							.																			.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		S	K	A	A	L	L	K	K	F	S	.	.	.	.	.	.	.	E	D	V	N	I	P	E	P	Q	G	E	E	V	L	I	R	I	G	G	A	G	V	C	R	T	D	L	R	V	W	K	G	V	E	A	K	Q	G	F	R	L	P	I	I	L	G	H	E	N	A	G	T	I	V	E	V	G	E	L	A	K	V	K
Template Known Secondary structure				B					S			.	.	.	.	.	.	.										T	T																				T	T	S				T	T			S	S																T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.								.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	Q	E	V	L	L	T	G	W	G	V	G	E	N	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	A	E	Q	A	R	V	K	G	D	W	L	V	A	M	P	Q	G	L	D	A	R	K	A	M	I	I	G	T	A	G	F	T	A	M	L	C	V	M	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	D	N	V	V	V	Y	A	T	W	G	D	L	T	C	R	Y	C	R	E	G	K	F	N	I	C	K	N	Q	I	I	P	G	Q	T	T	N	G	G	F	S	E	Y	M	L	V	K	S	S	R	W	L	V	K	L	N	S	L	S	P	V	E	A	A	P	L	A	D	A	G	T	T	S	M	G	A	I	R	Q
Template Known Secondary structure		T	T							S		B			S		S	T	T	G	G	G	T		G	G	G		T	T		B		B	T	T	T	B			S	S	B	S					S		G	G	G					S	S	S						G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																					.																															.	.	.
Query SS confidence																																					.																															.	.	.
Query Sequence		L	E	D	A	G	V	R	P	Q	D	G	E	I	V	V	T	G	A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	.	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	L	G	A	S	R	V	L	P	R	D	E	F	A	.	.	.	E	S	R	P	L	E	K	Q	V	W	A
Query Conservation																																					.																															.	.	.
Alig confidence																																					.																															.	.	.
Template Conservation
Template Sequence		A	L	P	F	I	S	K	F	A	E	P	V	V	I	V	N	G	I	G	G	L	A	V	Y	T	I	Q	I	L	K	A	L	M	K	N	I	T	I	V	G	I	S	R	S	K	K	H	R	D	F	A	L	E	L	G	A	D	Y	V	S	E	M	K	D	A	E	S	L	I	N	K	L	T	D	G	L	G	A	S	I
Template Known Secondary structure							T	T		S	S									S															T	T								S												T		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	D	T	V	G	D	K	V	L	A	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	F	T	L	P	T	T	V	M	P	F	I	L	R	N	V	R	L	Q	G	V	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V	A	D	L	P	E	S	F	Y	T	Q
Query Conservation
Alig confidence																																.																										.	.	.	.	.	.
Template Conservation																																.																										.	.	.	.	.	.
Template Sequence		A	I	D	L	V	G	T	E	E	T	T	Y	N	L	G	K	L	L	A	Q	E	G	A	I	I	L	V	G	M	E	.	G	K	R	V	S	L	E	A	F	D	T	A	V	W	N	K	K	L	L	G	S	N	Y	G	S	.	.	.	.	.	.	L	N	D	L	E	D	V	V	R	L	S	E	S	G	K	I	K	P
Template Known Secondary structure					S	S																										.	S	S												T	T								S			.	.	.	.	.	.													T	T	S	S
Template Predicted Secondary structure																																.																										.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		294	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	E	I	S	L	S	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	I	K	V	P	L	G	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions