Job Description P26646 Confidence 100.00% Date Thu Jan 5 11:43:02 GMT 2012 Rank 18 Aligned Residues 312 % Identity 16% Template c2dphA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase Resolution 2.27 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.
Predicted Secondary structure																															.	.	.	.	.	.																																											.	.
Query SS confidence																															.	.	.	.	.	.																																											.	.
Query Sequence		M	Q	A	L	L	L	E	Q	Q	D	G	K	T	L	A	S	V	Q	T	L	D	E	S	R	L	P	E	G	D	.	.	.	.	.	.	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	R	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	T	.	.	S
Query Conservation																															.	.	.	.	.	.																																											.	.
Alig confidence									.	.	.																				.	.	.	.	.	.																										.	.																.	.
Template Conservation									.	.	.																																																			.	.
Template Sequence		N	K	S	V	V	Y	H	.	.	.	G	T	R	D	L	R	V	E	T	V	P	Y	P	K	L	E	H	N	N	R	K	L	E	H	A	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	I	Y	R	G	R	F	I	V	P	.	.	K	G	H	V	L	G	H	E	I	T	G	E	V	V	E	K	G	S
Template Known Secondary structure									.	.	.		T	T												S			T	T				T	T																				T	T	S	S				.	.	T	T		B														T
Template Predicted Secondary structure									.	.	.																																																			.	.
Template SS confidence
		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																																	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	P	R	F	H	A	G	Q	E	V	L	L	T	G	W	G	V	G	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	W	G	G	L	A	E	Q	A	R	V	K	G	D	W	L	V	A	M	P	Q	G	L	D	A	R	K
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	E	L	M	D	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	N	C	K	E	A	R	S	D	V	C	E	N	N	L	V	N	P	D	A	D	L	G	A	F	G	F	D	L	K	G	W	S	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	Y	M	L	L	K	F	G	D	K	E	Q	A
Template Known Secondary structure		T			S			T	T							S	B				S		S					T	T		G	G	G				T	T	T		S	S	S	S			B	T	T	T	T	B	S	S				S	S	B	S					S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		121	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		A	M	I	I	G	.	.	T	A	G	F	T	A	M	L	C	V	M	A	L	E	D	A	G	V	R	P	Q	D	G	E	I	V	V	T	G	A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	L	G	A	S	R	V	L	P	R
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		M	E	K	I	K	D	L	T	L	I	S	D	I	L	P	T	G	F	H	G	C	V	S	A	G	V	K	P	G	S	H	V	Y	I	A	G	A	G	P	V	G	R	C	A	A	A	G	A	R	L	L	G	A	A	C	V	I	V	G	D	Q	N	P	E	R	L	K	L	L	S	D	A	G	F	E	T	I	D	L	R
Template Known Secondary structure				T					T	T	T	T	T												T	T			T	T									S														T		S							S										T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.																.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.													.	.
Predicted Secondary structure											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	F	A	E	S	R	P	L	.	.	.	.	E	K	Q	V	W	A	G	A	I	D	T	V	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	F	T
Query Conservation											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	A	P	L	R	D	Q	I	D	Q	I	L	G	K	P	E	V	D	C	G	V	D	A	V	G	F	E	A	H	G	L	G	D	E	A	N	T	E	T	P	N	G	A	L	N	S	L	F	D	V	V	R	A	G	G	A	I	G	I	P	G	I	Y	V	G	S	D	P	D	P	V	N	K	D	A	G	S	G	R
Template Known Secondary structure		S	S	S											S	S	S									S		T	T		B		S	G	G	G	T	T	S	B		T	T																				S				S			S	S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		L	P	T	T	V	M	P	F	I	L	R	N	V	R	L	Q	G	V	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V	A	D	L	P	E	S	F	Y	T	Q	.	.	.	.	.	A	A	K	E	I	S	L	S	E	A	P	N	F	A	E	A	I	I	N	N	Q	I	Q	G	R	T	L	V	K
Query Conservation																																																.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																			.	.	.	.	.																							.
Template Conservation																								.	.	.	.	.	.																																														.
Template Sequence		L	H	L	D	F	G	K	M	W	T	K	S	I	R	I	M	T	G	M	A	P	V	.	.	.	.	.	.	T	N	Y	N	R	H	L	T	E	A	I	L	W	D	Q	M	P	Y	L	S	K	V	M	N	I	E	V	I	T	L	D	Q	A	P	D	G	Y	A	K	F	D	K	G	S	P	.	A	K	F	V	I	D
Template Known Secondary structure												T	T						S	S			G	.	.	.	.	.	.	G	G	T										T	T																S	T	T										T	T		S	.
Template Predicted Secondary structure																								.	.	.	.	.	.																																														.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.							340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390
		323	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		391	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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