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Job DescriptionP26646
Confidence61.50%DateThu Jan 5 11:43:02 GMT 2012
Rank228Aligned Residues105
% Identity9%Templatec2cmgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.. .......200.....
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Query Sequence  MLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA. . . . . . SRVLPRDEFAESR
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Template Sequence  ESELLAHMGGCTKKELKEVLIVDGFDLELAHQLF. . . KYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD
Template Known Secondary structure  TTSS


SS

T...TSS

S
GGGTTTSTTT
TTSSGGG
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   58.60.........70.........80.........90. ........100.........110.........120.........130....
 
   206...210.........220. ........230.........
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Query Sequence  PLEKQVWAGAIDTVGD. KVLAKVLAQMNYGGCVAA
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Template Sequence  LDIKKYDLIFCLQEPDIHRIDGLKRMLKEDGVFIS
Template Known Secondary structure  S



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   135....140.........150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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