 |
Job Description | P26646 | Confidence | 23.84% | Date | Thu Jan 5 11:43:02 GMT 2012 |
Rank | 467 | Aligned Residues | 82 |
% Identity | 18% | Template | c1luaA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; |
PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp
|
Resolution | 1.90 Å |
|
 |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | G | V | R | P | Q | D | G | E | I | V | V | T | G | A | S | G | G | V | G | S | T | A | V | A | L | L | H | K | L | G | Y | Q | V | V | A | V | S | G | R | E | S | T | H | E | Y | L | K | S | L | . |
. |
. |
. |
. |
. |
G | A | S | R | V | L | P | R | D | E | F | A | E | S | R | P | L | E | K | Q | V | W | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
Template Sequence |   |
A | A | G | G | S | V | K | G | K | K | A | V | V | L | A | G | T | G | P | V | G | M | R | S | A | A | L | L | A | G | E | G | A | E | V | V | L | C | G | R | K | L | D | K | A | Q | A | A | A | D | S | V | N | K | R | F | K | V | N | V | T | A | A | E | T | A | D | D | A | S | R | A | E | A | V | K | G | A | H | F |
Template Known Secondary structure |   |
 | T | T | S |
|
| T | T |
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  | T | T | T |
| S |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
214 | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | I | D | T | V | G | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
Template Sequence |   |
V | F | T | A | G | A | I | G |
Template Known Secondary structure |   |
 |  |  |
|
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|