 |
Job Description | P0ADG1 | Confidence | 80.87% | Date | Thu Jan 5 11:20:56 GMT 2012 |
Rank | 55 | Aligned Residues | 63 |
% Identity | 17% | Template | c1tdjA_ |
PDB info |
PDB header:allostery | Chain: A: PDB Molecule:biosynthetic threonine deaminase; |
PDBTitle: threonine deaminase (biosynthetic) from e. coli
|
Resolution | 2.80 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | M | Q | H | Q | V | N | V | S | A | R | F | N | P | E | T | L | E | R | V | L | R | V | V | R | H | R | G | F | H | V | C | S | M | N | M | A | A | A | S | D | A | Q | N | I | N | I | E | L | T | V | A | . |
. |
. |
S | P | R | S | V | D | L | L | F | S | Q | L | N | K |
Query Conservation |   |
|
|   |   |   |
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|   | . | . | . |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   | . | . |   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
Q | R | E | A | L | L | A | V | T | I | P | E | E | K | G | S | F | L | K | F | C | Q | L | L | G | G | R | . |
. |
S | V | T | E | F | N | Y | . |
R | F | A | D | A | K | N | A | C | I | F | V | G | V | R | L | S | R | G | L | E | E | R | K | E | I | L | Q | M | L | N | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
| B | S | S | S |
| S |  |  |  |  |  | T | T | S | S | S | . | . |  |  |  |  |  |  |  | . |  |
|
|
| S | S | B |
|  |  |  |  |  |  |  |
| S | S | T |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | |
|
. | . | . | . | . | . | . | |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|