Job Description P45420 Confidence 83.34% Date Thu Jan 5 12:02:33 GMT 2012 Rank 24 Aligned Residues 150 % Identity 9% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	W	V	I	S	A	S	S	G	W	N	L	T	R	W	S	A	M	N	G	G	V	I	V	A	.	.	E	N	Y	Q	A	A	S	I	R	S	S	L	V	P	L	P	D	L	T	V	S	S	Q	I	S	T	S	Q	D	T	K	D	S	L	Q	G	Q	K	Y	R	L	D	A	N	Y	N	L	P	F	S	L	G	L
Query Conservation																											.	.
Alig confidence																											.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	.	.	.	.	.	.	.	.	.	.	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F
Template Known Secondary structure															T	T												G	G	G									T	T	S		.	.	.	.	.	.	.	.	.	.																								S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.											.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	S	L	T	R	S	D	R	H	Y	R	E	L	S	E	A	I	D	D	D	Y	T	D	P	T	K	S	T	Y	A	L	G	L	N	W	S	N	S	I	L	G	G	F	N	I	S	G	Y	K	T	Y	S	Y	D	G	D	N	D	S	S	N	L	N	I	N	W	N	K	A	F	K	H	A	T	V	S	V	N	W
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		R	T	G	I	A	F	D	D	S	P	V	P	A	.	.	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L	F	G	T	N	F	N	Y
Template Known Secondary structure											S	S		T	.	.	T	T			S	S	S																S	S	S	S																				T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		507	.	.	510
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	H	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions