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Job DescriptionP45420
Confidence99.67%DateThu Jan 5 12:02:33 GMT 2012
Rank9Aligned Residues78
% Identity19%Templatec3l48B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:outer membrane usher protein papc; PDBTitle: crystal structure of the c-terminal domain of the papc usher
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   711........720.........730.........740.........750.........760...... ...770.........780.........
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Query Sequence  QRRALLNITLSDGKKLPRGVAIEDSEGNYLTTSVDDGVVFLNNIKPDMVLDIKDEQ. QSCRIHLTFPEDAPKDVFYETAT
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Template Sequence  GKRLFAILRLADGSQPPFGASVTSEKGRELGMVADEGLAWLSGVTPGETLSVNWDGKIQCQVNVPETAISDQQLL. . . . .
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   728.730.........740.........750.........760.........770.........780.........790.........800..
 
   790...
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Query Sequence  GECQ
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Template Sequence  LPCT
Template Known Secondary structure  B
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   803...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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