Job Description P45420 Confidence 35.25% Date Thu Jan 5 12:02:33 GMT 2012 Rank 46 Aligned Residues 149 % Identity 11% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		P	W	V	I	S	A	S	S	G	W	N	L	T	R	W	S	A	M	N	G	G	V	I	V	A	E	N	Y	Q	A	A	S	I	R	S	S	L	V	P	L	P	D	L	T	V	S	S	Q	I	S	T	S	Q	.	D	T	K	D	S	L	Q	G	Q	K	Y	R	L	D	A	N	Y	N	L	P	F	S	L	G	L	T
Query Conservation																																																							.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	Y	A	S	L	D	W	V	H	Q	F	N	D	R	L	S	L	G	A	S	A	T	W	T	E	.	.	.	.	.	.	.	.	.	.	W	S	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	N	T	W	T	L	A	V	G	G	D	Y	K	V	T	D	Q	W	T	M	R
Template Known Secondary structure														S	S	S												.	.	.	.	.	.	.	.	.	.	G	G	G									T	T																								S	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.											.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	L	T	R	S	D	R	H	Y	R	E	L	S	E	A	I	D	D	D	Y	T	D	P	T	K	S	T	Y	A	L	G	L	N	W	S	N	S	I	L	G	G	F	N	I	S	G	Y	K	T	Y	S	Y	D	G	D	N	D	S	S	.	.	.	.	.	.	.	.	.	.	N	L	N	I	N	W	N	K	A	F
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		A	G	V	A	Y	D	Q	T	P	T	H	N	.	.	A	T	R	D	P	R	I	P	D	G	D	R	Y	F	A	S	L	G	A	G	Y	R	F	Q	S	M	P	E	L	S	I	D	A	A	Y	S	R	Q	F	V	K	E	V	P	L	K	T	V	N	Q	D	R	L	G	G	G	R	L	D	G	R	A	T	S	K	G
Template Known Secondary structure										S			T	.	.	T	T			S	S	S																	S	S	S	S	S																				B			G	G	G	T	S
Template Predicted Secondary structure														.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		498	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	A	T	V	S	V	N	W	Q	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	F	S	L	S	A	T	Y	D	F	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions