 |
| Job Description | P45420 | | Confidence | 44.77% | Date | Thu Jan 5 12:02:33 GMT 2012 |
| Rank | 40 | Aligned Residues | 31 |
| % Identity | 29% | Template | c2r32A_ |
| PDB info |
PDB header:immune system | Chain: A: PDB Molecule:gcn4-pii/tumor necrosis factor ligand |
PDBTitle: crystal structure of human gitrl variant
|
| Resolution | 1.95 Å |
|
| | |
262 | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
| Predicted Secondary structure | |
 |  |
|
|
|
|
| | | | | | |
|
| . | | | | | | | | |
|
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | A | N | T | S | Q | A | R | V | E | I | R | Q | Q | G | . |
V | L | I | H | S | I | L | V | P | A | G | A | F | T | I | P |
| Query Conservation | |
|
| |
|
| |
| |
|
|
| |
|
|
| . | | |
|
| | | |
|
|
|
| |
| |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | |
|
|
|
|
|
|
| |
| |
|
|
| |
|
| |
|
|
| | |
|
|
| | | |
| Template Sequence | |
V | N | K | V | S | D | W | K | L | E | I | L | Q | N | G | L | Y | L | I | Y | G | Q | V | A | P | N | A | P | F | E | V | R |
| Template Known Secondary structure | |
| | | | | T | T | | | | |
| S |
| | | | | | | | | |
| B |
|
|
|
|
| | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
| | | | | | |
|
| | | | | | | | |
|
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
