Job Description P0A921 Confidence 4.30% Date Thu Jan 5 11:09:12 GMT 2012 Rank 33 Aligned Residues 113 % Identity 18% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	G	N	W	L	V	E	V	K	P	W	Y	V	V	G	N	T	D	D	N	P	D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	G	D	A	V	L	S	A	K	G	Q	Y	N
Query Conservation
Alig confidence																							.	.	.																												.	.	.	.	.	.	.
Template Conservation																							.	.	.																												.	.	.	.	.	.	.
Template Sequence		I	S	L	A	A	A	Y	T	T	D	A	G	G	I	V	D	N	D	I	A	F	.	.	.	V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L	N	W	Y	D	N	G	L	S	T	A	G	D	.	.	.	.	.	.	.	Q	V	T	L	Y	G	N	Y	A	F	G	A	T	T	V	R	A	Y	V	S	D	I
Template Known Secondary structure											S	G	G	G		T	T						.	.	.								S	S	S											T	T	S	T	T		S	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																							.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		236	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		W	N	T	G	Y	G	.	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T	Q	V	Y	S	G	Y	G	E	S	L	I	D	Y	N	F	N	Q	T	R	V	G	V	G	V	M	L	N
Query Conservation								.
Alig confidence								.																							.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		D	R	A	G	A	D	T	A	Y	G	I	G	A	D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	.	.	.	.	.	.	.	.	G	F	A	N	E	T	V	A	D	V	G	V	R	F	D
Template Known Secondary structure			S	T	T															T	T										.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.									.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions