Job Description P0A921 Confidence 14.69% Date Thu Jan 5 11:09:12 GMT 2012 Rank 9 Aligned Residues 78 % Identity 22% Template c2vvdA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:spike protein p1; PDBTitle: crystal structure of the receptor binding domain of the2 spike protein p1 from bacteriophage pm2 Resolution 2.26 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	D	V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	G	N	W	L	V	E	V	K	P	W	Y	V	V	G	N	T	D	D	N	P	D	.	I	T	K	Y	M	G	Y	Y	Q	L
Query Conservation																																																																							.
Alig confidence																	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	F	D	I	D	V	P	P	E	L	D	G	V	P	F	.	S	L	K	A	R	V	R	H	K	S	K	G	V	D	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	S	I	S	V	K	P	A	F	Y	I	T	E	G	D	E	T	T	D	T	L	I	K	Y	T	S	Y	G	S	T
Template Known Secondary structure									G	G	G	T	T				.									B		T	T	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					B								S	S		T	T												B
Template Predicted Secondary structure																	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.																.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		218	.			220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		K	I	.	.	G	Y	H	L	G	D	A	V	L	S	A	K	G
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		G	S	H	S	G	Y	D	F	D	D	N	T	L	D	V	X	V
Template Known Secondary structure		S			B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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