Job Description P0A921 Confidence 2.58% Date Thu Jan 5 11:09:12 GMT 2012 Rank 72 Aligned Residues 141 % Identity 16% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	E	S	S	P	F	R	E	T	N	Y	E	P	Q	L	F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	D	V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	G	N	W	L	V	E	V	K	P	W	Y	V	V	G	N	T
Query Conservation
Alig confidence																												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	.	.	.	.	.	.	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	.	.	.	.	.	.	.	F	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D
Template Known Secondary structure				S				S																	T	T		.	.	.	.	.	.																	S	S				S	.	.	.	.	.	.	.	S															S	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																	.	.	.
Query SS confidence																													.	.	.	.	.																																	.	.	.
Query Sequence		D	D	N	P	D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	G	D	A	V	L	S	.	.	.	.	.	A	K	G	Q	Y	N	W	N	T	G	Y	G	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T	Q	V	.	.	.	Y	S	G	Y	G	E	S	L	I	D	Y	N	F
Query Conservation																													.	.	.	.	.																																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G	T	R	P
Template Known Secondary structure		.	.	.	.	.	.	.	.																			S				S	S	S																						S	S	S								S	S		S	S					S					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	T	R	V	G	V	G	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	G	M	L	S	L	G	V	S
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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