Job Description P0A921 Confidence 82.83% Date Thu Jan 5 11:09:12 GMT 2012 Rank 3 Aligned Residues 160 % Identity 15% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		N	S	E	E	S	S	P	F	R	E	T	N	Y	E	P	Q	L	F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	D	V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	.	.	.	G	N	W	L	V	E	V	K	P	W	Y	V
Query Conservation																																																																			.	.	.
Alig confidence																					.	.	.	.																			.																								.	.	.
Template Conservation																					.	.	.	.																			.
Template Sequence		N	V	E	G	Y	G	E	D	M	D	G	L	A	E	P	S	V	Y	F	.	.	.	.	N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	.	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R
Template Known Secondary structure				S	S	S	B	T	T	B	T										.	.	.	.					T	T													.			T	T	T	T				S																	S	S
Template Predicted Secondary structure																					.	.	.	.																			.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		199	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure					.	.	.																							.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																							.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	N	.	.	.	T	D	D	N	P	D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	.	.	.	G	D	A	V	L	S	A	K	G	Q	.	.	.	.	.	.	.	.	.	.	Y	N	W	N	T	G	Y	G	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T	Q	V	Y
Query Conservation					.	.	.																							.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																							.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y
Template Known Secondary structure								S	S		T	T																				S	S	S														S									S														S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		263	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		S	G	Y	G	E	S	L	I	D	Y	.	.	.	.	N	F	N	Q	T	R	V	G	V	G	V	M	L	N
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T
Template Known Secondary structure								S	S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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