Job Description P0A6T1 Confidence 97.48% Date Thu Jan 5 11:03:51 GMT 2012 Rank 38 Aligned Residues 156 % Identity 17% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	M	K	T	F	S	E	A	I	I	S	G	E	W	K	G	Y	T	G	K	A	I	T	D	V	V	N	I	G	I	G	G	S	D	L	G	P	Y	M	V	T	E	A	L	R	P	Y	K	N	H	L	N	M	H	F	V	S	N	V	D	G	T	H	I	A	E	V	L	K	K	V	N	P	E	T	T	L	F
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																				.	.	.														.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																																				.	.	.														.
Template Sequence		P	E	A	I	E	A	A	V	E	A	I	R	A	.	.	.	.	.	.	.	.	.	.	.	D	H	V	I	V	V	G	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	.	.	.	G	S	T	L	T	I	T	L	A	N	L	R	P	.	T	D	L	X
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	S								G	G	G														T	T										.	.	.	T									T			T	.	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																				.	.	.														.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		L	V	A	S	K	T	F	T	T	Q	E	T	M	T	N	A	H	S	A	R	D	W	F	L	K	A	A	G	D	E	K	H	V	A	K	H	F	A	A	L	S	T	N	A	K	A	V	G	E	F	G	I	D	T	A	N	M	F	E	.	.	F	W	D	W	V	G	G	R	Y	S	L	W	S	A	I	G	L	S	I
Query Conservation																																																													.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	V	S	V	W	R	Y	L	R	D	T	V	A	A	L	A	G	A	A	E	.	.	.	.	.	.	.	.	.	.	.	R	G	V	P	T	X	A	L	T	D	S	S	V	S	P	P	A	R	I	A	D	H	V	L	V	A	A	T	R	G	V	G	H	S	L	S	P	V	G	L	I	A	V	V	N	L	L	L
Template Known Secondary structure							S	S															.	.	.	.	.	.	.	.	.	.	.	T	T								S		T	T	S							S										S	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	I	G	F	D	N	F	V	E	L	L	S	G	A	H	A	M	D	K	H	F	S	T
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		A	E	I	A	V	R	E	P	.	E	R	A	L	A	V	L	R	E	V	D	R	L	Y	R	E
Template Known Secondary structure										.
Template Predicted Secondary structure										.
Template SS confidence
		256	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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