Job Description P0A6T1 Confidence 23.51% Date Thu Jan 5 11:03:51 GMT 2012 Rank 86 Aligned Residues 106 % Identity 19% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	A	I	K	S	M	F	S	G	E	K	I	N	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	R	A	V	L	H	V	A	L	R	N	R	S	N	T	P	I	L	V	D	G	K	D	V	M	P	E	V	N	A	V	L	E	K	M	K	T	F	S	E	A	I	I	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		L	S	I	Q	L	A	Q	K	F	N	G	E	V	I	N	S	D	S	M	Q	V	Y	K	D	I	P	I	I	T	N	K	H	P	L	Q	E	R	E	G	I	P	H	H	V	M	N	H	V	D	W	S	E	E	Y	.	.	.	.	.	.	.	.	Y	S	H	R	F	E	T	E	C	M	N	A	I	E	D	I	H	R
Template Known Secondary structure										T	T		B						T	T	T	S	S	S	S										G	G	G	G	T	T					S		S		S		S	S				.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		G	E	W	K	G	Y	T	G	K	A	I	T	D	V	V	N	I	G	I	G	G	S	D	L	G	P	Y	M	V	T	E	A	L	R	P	Y	K	N	H	L	N	M	.	.	.	.	.	.	H	F	V	S	N	V	D	G	T	H	I	A	E	V	L	K	K	V	N	P	E
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	G	K	I	P	I	V	V	G	G	T	H	Y	Y	L	Q	T	L	F	N	K	R	V	D	T	K	S	S	E	R	K	L	T	R	K	Q	L	D	I	L	E	S	T	D	P	D	V	I	Y	N	T	L	V	K	C	D	P	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T			B					S		T	T	G	G	G	G	G	B	S		S			T	T	T														T		S												S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions