Job Description P0A6T1 Confidence 31.80% Date Thu Jan 5 11:03:51 GMT 2012 Rank 73 Aligned Residues 106 % Identity 18% Template c3d3qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 Resolution 2.70 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	A	I	K	S	M	F	S	G	E	K	I	N	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	R	A	V	L	H	V	A	L	R	N	R	S	N	T	P	I	L	V	D	G	K	D	V	M	P	E	V	N	A	V	L	E	K	M	K	T	F	S	E	A	I	I	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		L	S	I	E	V	A	K	K	F	N	G	E	I	I	S	G	D	S	X	Q	V	Y	Q	G	X	D	I	G	T	A	K	V	T	T	E	E	X	E	G	I	P	H	Y	X	I	D	I	L	P	P	D	A	S	F	.	.	.	.	.	.	.	.	S	A	Y	E	F	K	K	R	A	E	K	Y	I	K	D	I	T	R
Template Known Secondary structure										T	T								S	S	T	T	B	T	T			T	T	T	T				T	T	T	T	T	T					S	S	S		B		T	T	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		G	E	W	K	G	Y	T	G	K	A	I	T	D	V	V	N	I	G	I	G	G	S	D	L	G	P	Y	M	V	T	E	A	L	R	P	Y	K	N	H	L	N	M	H	F	.	.	.	.	V	S	N	V	D	G	T	H	I	A	E	V	L	K	K	V	N	P	E
Query Conservation																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	G	K	V	P	I	I	A	G	G	T	G	L	Y	I	Q	S	L	L	Y	N	Y	A	F	E	D	K	X	K	Q	V	K	L	K	L	K	E	L	E	H	L	N	N	N	K	L	H	E	Y	L	A	S	F	D	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T																		B		S																		S	S		S	S								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions