Job Description P0A6T1 Confidence 97.32% Date Thu Jan 5 11:03:51 GMT 2012 Rank 40 Aligned Residues 143 % Identity 11% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	V	L	E	K	M	K	T	F	S	E	A	I	I	S	G	E	W	K	G	Y	T	G	K	A	I	T	D	V	V	N	I	G	I	G	G	S	D	L	G	P	Y	M	V	T	E	A	L	R	P	Y	K	N	H	L	N	M	H	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	V
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	.	.	.	.	.	.	.	.	.	.	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L
Template Known Secondary structure																	T	T		.	.	.	.	.	.	.	.	.	.							S	T															T		S	S	S										S	S										T	T	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		D	G	T	H	I	A	E	V	L	K	K	V	N	P	E	T	T	L	F	L	V	A	S	K	T	F	T	T	Q	E	T	M	T	N	A	H	S	A	R	D	W	F	L	K	A	A	G	D	E	K	H	V	A	K	H	F	A	A	L	S	T	N	.	A	K	A	V	G	E	F	G	I	D	T	A	N	M	F	E	F
Query Conservation																																																																.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	.	.	.	.	.	.	.	.	.	.	.	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I
Template Known Secondary structure		G	G	G	T	T										T	T								S	S	S															.	.	.	.	.	.	.	.	.	.	.	T	T									T	T										T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		264	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		W	D	W	V	G	G	R	Y	.	.	S	L	W	S	A	I	G	L	S	I	V	L	S
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		P	S	H	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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