|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | T | Q | T | A | A | W | Q | A | L | Q | K | H | F | D | E | M | K | D | V | T | I | A | D | L | F | A | K | D | G | D | R | F | S | K | F | S | A | T | F | D | D | Q | M | L | V | D | Y | S | K | N | R | I | T | E | E | T | L | A | K | L | Q | D | L | A | K | E | C | D | L | A | G | A | I | K | S | M | F | S |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
D | I | T | A | T | P | A | W | D | A | L | A | R | H | H | D | Q | I | G | N | T | H | L | R | Q | F | F | A | D | D | P | G | R | G | R | E | L | T | V | S | V | G | D | . |
L | Y | I | D | Y | S | K | H | R | V | T | R | E | T | L | A | L | L | I | D | L | A | R | T | A | H | L | E | E | R | R | D | Q | M | F | A |
Template Known Secondary structure |   |
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| T | T |  |  |  |  | S |  |  |  |  | T | T | . |  |  |  |  |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | K | I | N | R | T | E | N | R | A | V | L | H | V | A | L | R | N | R | S | N | T | P | I | L | V | D | G | K | D | V | M | P | E | V | N | A | V | L | E | K | M | K | T | F | S | E | A | I | I | S | G | E | W | K | G | Y | T | G | K | A | I | T | D | V | V | N | I | G | I | G | G | S | D | L | G | P | Y | M |
Query Conservation |   |
|
|   |
|
|   |
|
|   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
Template Sequence |   |
G | V | H | I | N | T | S | E | D | R | A | V | L | H | T | A | L | R | L | P | R | D | A | E | L | V | V | D | G | Q | D | V | V | T | D | V | H | A | V | L | D | A | M | G | A | F | T | D | R | L | R | S | G | E | W | T | G | A | T | G | K | R | I | S | T | V | V | N | I | G | I | G | G | S | D | L | G | P | V | M |
Template Known Secondary structure |   |
T |
|
|
| B | T | T | T | T | B |
|
|
| G | G | G | G | G |
|
| T | T |
|
|
|  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | B |
| S | S | S |
| B |
|
|  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | |
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | E | A | L | R | P | Y | K | N | . |
H | L | N | M | H | F | V | S | N | V | D | G | T | H | I | A | E | V | L | K | K | V | N | P | E | T | T | L | F | L | V | A | S | K | T | F | T | T | Q | E | T | M | T | N | A | H | S | A | R | D | W | F | L | K | A | A | G | D | E | K | H | V | A | K | H | F | A | A | L |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   | . |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   | . |   |   |
|   |
|
|
|
Template Sequence |   |
V | Y | Q | A | L | R | H | Y | A | D | A | G | I | S | A | R | F | V | S | N | V | D | P | A | D | L | I | A | T | L | A | D | L | D | P | A | T | T | L | F | I | V | A | S | K | T | F | S | T | L | E | T | L | T | N | A | T | A | A | R | R | W | L | T | D | A | L | G | D | A | A | V | . |
S | R | H | F | V | A | V |
Template Known Secondary structure |   |
 |  |  |  | T | G | G | G |
|
| S | S |
|  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | . | G | G | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | . | . | . | . | . |
  |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | N | A | K | A | V | G | E | F | G | I | D | T | A | N | M | F | E | F | W | D | W | V | G | G | R | Y | S | L | W | S | A | I | G | L | S | I | V | L | S | I | G | F | D | N | F | V | E | L | L | S | G | A | H | A | M | D | K | H | F | S | T | T | P | A | E | K | N | L | P | V | L | L | A | L | I | G | I | W |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |
Template Sequence |   |
S | T | N | K | R | L | V | D | D | F | G | I | N | T | D | N | M | F | G | F | W | D | W | V | G | G | R | Y | S | V | D | S | A | I | G | L | S | L | M | T | V | I | G | R | D | A | F | A | D | F | L | A | G | F | H | I | I | D | R | H | F | A | T | A | P | L | E | S | N | A | P | V | L | L | G | L | I | G | L | W |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |
|
|
| T | T | S |
| G | G | G |
| T | T | T | G | G | G |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . |
  |
  |   |
324 | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | N | N | F | F | G | A | E | T | E | A | I | L | P | Y | D | Q | Y | M | H | R | F | A | A | Y | F | Q | Q | G | N | M | E | S | N | G | K | Y | V | D | R | N | G | N | V | V | D | Y | Q | T | G | P | I | I | W | G | E | P | G | T | N | G | Q | H | A | F | Y | Q | L | I | H | Q | G | T | K | M | V | P | C | D | F |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|   |
|
|
Template Sequence |   |
Y | S | N | F | F | G | A | Q | S | R | T | V | L | P | Y | S | N | D | L | S | R | F | P | A | Y | L | Q | Q | L | T | M | E | S | N | G | K | S | T | R | A | D | G | S | P | V | S | A | D | T | G | E | I | F | W | G | E | P | G | T | N | G | Q | H | A | F | Y | Q | L | L | H | Q | G | T | R | L | V | P | A | D | F |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
|  |  |  |  |  |  | S |
| G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | B | B | S | S | S |
| B |
| S | S |
|
|
|
|  |  |  |
|
|
| T | T | T | G | G | G | T | T |  |  |  |  |  |  | S | S |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
326 | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . |
  |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | P | A | I | T | H | N | P | L | . |
. |
. |
. |
. |
. |
S | D | H | H | Q | K | L | L | S | N | F | F | A | Q | T | E | A | L | A | F | G | K | S | R | E | V | V | E | Q | E | Y | R | D | Q | G | K | D | P | A | T | L | D | Y | V | V | P | F | K | V | F | E | G | N | R | P | T | N | S | I | L | L | R | E | I |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |
|
Template Sequence |   |
I | G | F | A | Q | P | L | D | D | L | P | T | A | E | G | T | G | S | M | H | D | L | L | M | S | N | F | F | A | Q | T | Q | V | L | A | F | G | K | T | A | E | E | I | A | A | D | . |
. |
. |
. |
. |
. |
. |
. |
G | T | P | A | H | V | V | A | H | K | V | M | P | G | N | R | P | S | T | S | I | L | A | S | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
|
|
|
| T | T | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| B |
|  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |
| B |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . |
  |
  |   |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | |
530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | F | S | L | G | A | L | I | A | L | Y | E | H | K | I | F | T | Q | G | V | I | L | N | I | F | T | F | D | Q | W | G | V | E | L | G | K | Q | L | A | N | R | I | L | P | E | L | K | D | D | K | E | . |
I | S | S | H | D | S | S | T | N | G | L | I | N | R | Y | K | A | W | R | G |
Query Conservation |   |
  |
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   | . |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|
Template Sequence |   |
T | P | S | V | L | G | Q | L | I | A | L | Y | E | H | Q | V | F | T | E | G | V | V | W | G | I | D | S | F | D | Q | W | G | V | E | L | G | K | T | Q | A | K | A | L | L | P | V | I | T | G | A | G | S | P | P | P | Q | S | D | S | S | T | D | G | L | V | R | R | Y | R | T | E | R | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | B |
| T | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |
  |