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Job DescriptionP77552
Confidence98.92%DateThu Jan 5 12:30:30 GMT 2012
Rank2Aligned Residues365
% Identity11%Templated1daba_
SCOP infoSingle-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  TVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGG
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Template Conservation       
   
     
   
                                                            
Template Sequence  VQIERGANVTVQRSAIVDGGLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGASELTLDGGHITGGRAAG
Template Known Secondary structure  TT
S

SB

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   129130.........140.........150.........160.........170.........180.........190.........200........
 
   124.....130.........140.........150.........160.........170.........180....... ..190.........
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Query Sequence  NLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKAS. . . . DTLLAGGTMNNL
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Template Sequence  VAAMQGAVVHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGVDVSGSSVELAQSIVEAPELGAAIR
Template Known Secondary structure  SS
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SSSSS
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   209210.........220.........230.........240.........250.........260.........270.........280........
 
   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  GGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVE
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Template Sequence  VGRGARVTVPGGSLSAPHGNVIETGGARRFAPQAAPLSITLQAGAHAQGKALLYRVLPEPVKLTLTGGADAQGDIVATEL
Template Known Secondary structure  TT
SS

SS

SSS

TT

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   289290.........300.........310.........320.........330.........340.........350.........360........
 
   280.........290.........300.........310.........320.........330.........340..... ....350......
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Query Sequence  LTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDA. . . ATHVQLKVKRL
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Template Sequence  PSIPGTSIGPLDVALASQARWTGATR. . . . AVDSLSIDNATWVMTDNSNVGALRLASDGSVDFQQPAEAGRFKVLTVNTL
Template Known Secondary structure  SSS
GGGS

TT

BS....
S

S
TT



SSTT


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   369370.........380.........390.... .....400.........410.........420.........430.........440....
 
   357..360.........370.........380.........390.........400.........410..
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Query Sequence  RGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIG
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Template Sequence  AGSGLFRMNVFADLGLSDKLVVMQDASGQHRLWVRNSGSEPASANTLLLVQTPLGS
Template Known Secondary structure 

GGGT

S
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SS
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   445....450.........460.........470.........480.........490.........500
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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