Job Description P77552 Confidence 98.15% Date Thu Jan 5 12:30:30 GMT 2012 Rank 4 Aligned Residues 266 % Identity 9% Template c3syjA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:adhesion and penetration protein autotransporter; PDBTitle: crystal structure of the haemophilus influenzae hap adhesin Resolution 2.20 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	G	T	T	S	A	V	V	V	D	E	G	G	E	L	L	V	Y	P	G	G	E	A	S	N	C	E	I	N	Q	G	G	V	F	M	L	A	G	K	A	S	D	T	L	L	A	G	G	T	M	N	N	L	G	G	E	D	S	D	T	I	V	E	N	G	S	I	Y	R	L	G	T	D	G	L	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	F	K	A	E	N	F	Q	I	K	G	G	S	A	V	V	S	R	N	V	S	S	I	E	G	N	W	T	V	S	N	N	A	N	A	T	F	G	V	V	P	N	Q	Q	N	T	I	C	T	R	S	D	W	T	G	L	T	T	C	Q	K	V	D	L	T	D	T	K	V	I	N	S	I	P	K	T	Q	I	N
Template Known Secondary structure													S	S						S	S												T	T									T	T	S									T	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	G	K	T	Q	N	L	S	V	N	V	G	G	R	A	E	V	H	A	G	T	L	E	N	A	V	I	Q	G	G	T	V	I	L	L	S	P	T	S	A	D	E	N	F	V	V	E	E	D	R	A	P	V	E	L	T	G	S	V	A	L	L	D	G	A	S	M	I	I	G	Y	G	A	E	L	Q	Q	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	I	N	L	T	D	N	A	T	A	N	V	K	G	L	A	K	L	N	G	N	V	T	L	T	N	H	S	Q	F	T	L	S	N	N	A	T	Q	I	G	N	I	R	L	S	D	N	S	T	A	T	V	D	N	A	N	L	N	G	N	V	H	L	T	D	S	A	Q	F	S	L	K	N	S	H	F	S	H	Q
Template Known Secondary structure		S						T	T							S	S					S						T	T							T	T					S						T	T							S	S				S						T	T							S					S
Template Predicted Secondary structure
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		I	T	V	Q	Q	G	G	V	L	I	L	D	G	S	T	V	K	G	D	S	V	T	F	I	V	G	N	I	N	L	N	G	G	K	L	W	L	I	T	D	A	A	T	H	V	Q	L	K	V	K	R	.	L	R	G	E	G	A	I	C	L	Q	T	S	A	K	E	I	S	P	D	F	I	N	V	K	G	E	V	T
Query Conservation																																																					.
Alig confidence													.																																								.
Template Conservation													.
Template Sequence		I	Q	G	D	K	G	T	T	V	T	L	.	E	N	A	T	W	T	M	P	S	D	T	T	L	Q	N	L	T	L	N	N	S	T	I	T	L	N	S	A	Y	S	R	F	N	T	L	T	V	N	G	K	L	S	G	Q	G	T	F	Q	F	T	S	S	L	F	G	Y	K	S	D	K	L	K	L	S	N	D	A	E
Template Known Secondary structure						T	T						.		S							S					S											S		G	G	G										S														T	T	T	T									T	T
Template Predicted Secondary structure													.
Template SS confidence
		810	.	.	.	.	.	.	.	.	.	820		.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	H	V	E	I	T	D	A	S	R	Q	T	L	C	N	A	L	K	L	Q	P	D	E	D	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	Y	I	L	S	V	R	N	T	G	K	E	P	E	T	L	E	Q	L	T	L	V	E	S	K	D	N
Template Known Secondary structure												S				S	S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		912	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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