Job Description P77552 Confidence 0.68% Date Thu Jan 5 12:30:30 GMT 2012 Rank 18 Aligned Residues 398 % Identity 12% Template c1wxrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:haemoglobin protease; PDBTitle: crystal structure of heme binding protein, an2 autotransporter hemoglobine protease from pathogenic3 escherichia coli Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		S	D	A	K	N	L	M	S	D	G	N	V	Q	I	V	K	T	G	E	V	I	G	A	T	Q	L	T	E	G	E	L	I	V	E	A	G	G	R	.	A	E	N	T	V	V	T	G	A	G	W	L	K	V	A	T	G	G	I	A	K	C	T	Q	Y	G	N	N	G	T	L	S	V	S	D	G	A	I	A	T	D
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		G	V	T	G	A	L	V	M	D	G	A	A	D	I	S	G	T	F	T	Q	E	N	G	R	L	T	L	Q	G	H	P	V	I	H	A	Y	N	T	Q	S	V	A	D	K	L	A	A	S	G	D	H	S	V	L	T	Q	P	T	S	F	S	Q	E	D	W	E	N	R	S	F	T	F	D	R	L	S	L	K	N	T
Template Known Secondary structure		T									S												S	S																									T	T						S	S	S			S	S		S																S
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	S	E	G	G	A	I	S	L	S	T	L	A	T	V	N	G	R	H	P	E	G	E	F	S	V	D	K	G	Y	A	C	G	L	L	L	E	N	G	G	N	L	R	V	L	E	G	H	R	A	E	K	I	I	L	D	Q	E	G	G	L	L	V	N	G	T	T	S	A	V	V	V	D	E	G	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	G	L	G	R	N	A	T	L	N	T	T	I	Q	A	D	N	S	S	V	T	L	G	D	S	R	V	F	I	D	K	N	D	G	Q	G	T	A	F	T	L	E	E	G	T	S	V	A	T	K	D	A	D	K	S	V	F	N	G	T	V	N	L	D	N	Q	S	V	L	N	I	N	D	I	F	N	G	G	I
Template Known Secondary structure							T	T											S						S		S						T	T	T	T	S	S	S													S	G	G	G	S											S	S							S
Template Predicted Secondary structure
Template SS confidence
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	V	Y	P	G	G	E	A	S	N	C	E	I	N	Q	G	G	V	F	M	L	A	G	K	A	S	D	T	L	L	A	G	G	T	M	N	N	L	G	G	E	D	S	D	T	I	V	E	N	G	S	I	Y	R	L	G	T	D	G	L	Q	L	Y	S	S	G	K	T	Q	N	L	S	V	N	V	G	G	R	A	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		Q	A	N	N	S	T	V	N	I	S	S	D	S	A	V	L	G	N	S	T	L	T	S	T	A	L	N	L	N	K	G	A	N	A	L	A	S	Q	S	F	V	S	D	G	P	V	N	I	S	D	A	T	L	S	L	N	S	R	P	D	E	V	S	H	T	L	L	P	V	Y	D	Y	A	G	S	W	N	L	K	G
Template Known Secondary structure					S								S	S					S					S							T	T							S					S	S						S	S					S	S		T	T				S	S	B														S
Template Predicted Secondary structure
Template SS confidence
		739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.
			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	V	H	A	G	T	L	E	N	A	V	I	Q	G	G	T	V	I	L	L	S	P	T	S	A	D	E	N	F	V	V	E	E	D	R	A	P	V	E	L	T	G	S	V	A	L	L	D	G	A	S	M	I	I	G	Y	G	A	E	L	Q	Q	S	T	I	T	V	Q	Q	G	G	V	L	I	L	D	G	S	T
Query Conservation		.
Alig confidence		.																																																																										.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	D	A	R	L	N	V	G	P	Y	S	M	L	S	G	N	I	N	V	Q	D	K	G	T	V	T	L	G	G	E	G	E	L	S	P	D	L	T	L	Q	N	Q	M	L	Y	S	L	F	N	G	Y	R	N	I	W	S	G	S	L	N	A	P	D	A	T	V	S	M	T	D	T	Q	W	S	.	.	.	.	.	.
Template Known Secondary structure		T	T							S	S											S	S								S			B		S													T	T	T		S																		S					.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		V	K	G	D	S	V	T	F	I	V	G	N	I	N	L	N	G	G	K	L	W	L	I	T	D	A	A	T	H	V	Q	L	K	V	K	R	L	.	R	G	E	G	A	I	C	L	Q	T	S	A	K	E	I	S	P	D	F	I	N	V	K	G	E	V	T	G	D	I	H	V	E	I	T	D	A	S	R	Q	T	L
Query Conservation																																							.
Alig confidence		.	.	.																				.	.	.	.												.												.	.	.	.	.
Template Conservation		.	.	.																				.	.	.	.																								.	.	.	.	.
Template Sequence		.	.	.	M	N	G	N	S	T	A	G	N	M	K	L	N	R	T	I	V	G	F	.	.	.	.	N	G	F	T	T	L	T	T	D	N	L	D	A	V	Q	S	A	F	V	M	R	T	K	.	.	.	.	.	A	D	K	L	V	I	N	K	S	A	T	G	H	D	N	S	I	W	V	N	F	L	K	K	P	S
Template Known Secondary structure		.	.	.			S											S						.	.	.	.															S									.	.	.	.	.																						S	S
Template Predicted Secondary structure		.	.	.																				.	.	.	.																								.	.	.	.	.
Template SS confidence
					893	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.					.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.						.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960
		399	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		C	N	A	.	.	.	L	K	L	Q	P	D	E	D	G	I	G	A	T	L	Q	P	A
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		N	K	D	T	L	D	I	P	L	V	S	A	P	E	A	T	A	D	N	L	F	R	A
Template Known Secondary structure		S	S	S											T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		968	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions