Return to main results Retrieve Phyre Job Id

Job DescriptionQ47319
Confidence5.10%DateThu Jan 5 12:36:46 GMT 2012
Rank73Aligned Residues63
% Identity17%Templated1vkpa_
SCOP infoPentein, beta/alpha-propeller Pentein Porphyromonas-type peptidylarginine deiminase
Resolution1.53

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120...... ...130.........140.........150.........160.........170.
Predicted Secondary structure 
















..........
















Query SS confidence 
























. . . . . . . . . .












































Query Sequence  PDYQPMVVFPASYADEQREVIFTPP. . . . . . . . . . AGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRL
Query Conservation        



   
           ..........      







 




   

 
  

 
 
     
 
 
Alig confidence 
























..........























........












Template Conservation 
     



     
             

 


  
 
 
         
   
   ........
  
  
  
 
 
Template Sequence  SHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPED. . . . . . . . IRVVEXSXNDSWF
Template Known Secondary structure 





TTTSTGGGTTS

TTTS
TT........S


SS

Template Predicted Secondary structure 



















........




Template SS confidence 















































































   21........30.........40.........50.........60.........70......... 80.........90..
 
   172
Predicted Secondary structure 
Query SS confidence 
Query Sequence  R
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  R
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   93
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions