Job Description P39359 Confidence 88.95% Date Thu Jan 5 11:59:49 GMT 2012 Rank 236 Aligned Residues 107 % Identity 16% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	E	A	P	L	K	L	N	D	L	A	R	L	V	A	K	A	K	S	L	G	L	D	V	V	V	C	A	P	D	P	R	T	S	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G	T	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P
Template Known Secondary structure			T	T	S																	T	T								S	S										T			S							G	G	G	T	T	T	S																							T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		R	V	P	V	L	I	G	V	G	S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	.	L	D	D	Y	Y	Q	Q	I	A	R
Query Conservation																																															.
Alig confidence																.	.	.	.																												.
Template Conservation																.	.	.	.
Template Sequence		E	V	S	V	I	T	G	A	G	I	E	S	G	D	.	.	.	.	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	K	A	K	D	P	Y	A	K	I	V	E	L	A	K	P	L	S	E
Template Known Secondary structure		T	S						S	S			S			.	.	.	.								T	T		S										T		S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions