Job Description P39359 Confidence 86.67% Date Thu Jan 5 11:59:49 GMT 2012 Rank 263 Aligned Residues 124 % Identity 15% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																												.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	.	.	.	.	.	.	.	.	E	F	S	Q	M	N	T	A	Q	R	M	.	.	.	.	.	.	.	.	.	.	.	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	.	.
Query Conservation																												.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																												.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.															.								.	.
Template Conservation																																																																								.
Template Sequence		V	N	D	F	R	L	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	.	V	G	I	R	L	S	P	F	A
Template Known Secondary structure																T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G	.							T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240
										82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	.	.	.	.	.	.	.	.	.	L	M	P	M	R	K	A	F	K	G	T	F	I	.	.	.	.	.	.	.	S	A	G	G	F	T	R	E	D	G	N	E	A
Template Known Secondary structure			T	T	T				S	S												T	T	T	T	T		S												.	.	.	.	.	.	.	.	.										S				.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.										.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.
		154	.	.	.	.		.	160	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	L	Q	N	E	.	N	I	V	G	I
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		V	S	K	G	R	T	D	L	V	A	Y
Template Known Secondary structure				T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions