Job Description P39359 Confidence 93.33% Date Thu Jan 5 11:59:49 GMT 2012 Rank 171 Aligned Residues 132 % Identity 14% Template d1r3sa_ SCOP info TIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																									.	.	.	.											.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.											.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	.	.	.	.	A	E	E	A	V	T	I	V	D	G	.	.	.	.	.	.	.	.	R	V	P	V	L	I	G	V	G	S	P	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.											.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																													.	.											.	.	.	.											.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		T	D	A	L	V	P	Y	L	V	G	Q	V	V	A	G	A	Q	A	L	Q	L	F	E	S	H	A	G	.	.	H	L	G	P	Q	L	F	N	K	F	A	L	P	Y	I	R	D	V	A	K	Q	V	K	A	R	L	R	E	A	G	L	A	P	V	P	M	I	I	F	A	K	D	G	H	F	A	L	E	E	L	A
Template Known Secondary structure															T	T		S							T	T	G	G	.	.	G	S									T																		T	T											T	T		G	G	G					T
Template Predicted Secondary structure																													.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
									83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	.	.	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L
Query Conservation		.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		Q	A	G	Y	E	V	V	G	L	D	W	T	V	A	P	K	K	A	R	E	C	V	G	K	T	V	T	L	Q	G	N	L	D	P	C	A	L	Y	A	S	E	E	E	I	G	Q	L	V	K	Q	M	L	D	D	F	G	P	H	R	Y	I	A	N	L	G	H	G	L	Y	P	D	M	D	P	E	H	V	G	A	F
Template Known Secondary structure		T	S	S		S						T	T	S											S	S	S								G	G	G	G	G	S																		S	S	S						S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		154	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		354	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions