Job Description P39359 Confidence 96.55% Date Thu Jan 5 11:59:49 GMT 2012 Rank 84 Aligned Residues 210 % Identity 17% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																				.
Template Sequence		G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	.	H	P	T	I	P	I	G	L	L	M	Y	A	N
Template Known Secondary structure		T	S	S															T	T		S	S								S			T	T															T	T																	.		S	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.
		83	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		S	T	D	.	.	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I
Query Conservation					.	.
Alig confidence					.	.																				.	.	.	.	.													.																		.	.	.	.	.
Template Conservation																										.	.	.	.	.													.																		.	.	.	.	.
Template Sequence		L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	.	.	.	.	.	A	D	V	P	V	E	E	S	A	P	F	R	.	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	.	.	.	.	.	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y
Template Known Secondary structure					T	T													T							.	.	.	.	.	T	T			G	G	G						.						T	T									T	T	.	.	.	.	.															S
Template Predicted Secondary structure																										.	.	.	.	.													.																		.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		161	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.	.																														.	.	.	.
Query SS confidence					.	.	.	.	.																														.	.	.	.
Query Sequence		V	G	I	.	.	.	.	.	K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	.	.	.	.	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F	A	P	E	L	S	V	G	I	Y	R	A	W	R	E	G	D
Query Conservation					.	.	.	.	.																														.	.	.	.
Alig confidence					.	.	.	.	.																						.								.	.	.	.																								.	.	.	.	.	.
Template Conservation																															.																																			.	.	.	.	.	.
Template Sequence		T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	.	A	A	P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	.	.	.	.	.	.	K	I	I	E	K	N	L	A	S	P
Template Known Secondary structure						S	S	S	S				S	S	S														T	T	.								S	S			S										T	T		S										.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																															.																																			.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	A	A	T	L	N	K	K	L	L	Q	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	M	L	A	E	L	R	S	F	V	S	A	M	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions