Job Description P39359 Confidence 96.76% Date Thu Jan 5 11:59:49 GMT 2012 Rank 68 Aligned Residues 170 % Identity 12% Template d1piia2 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	.	.	.	.	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	S	T	D	E	A	V	K	L	A	Q
Query Conservation																																													.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.								.	.	.	.											.	.																	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																						.	.																	.	.	.	.
Template Sequence		S	K	G	V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	K	H	Y	A	S	A	I	S	V	.	.	.	.	.	.	.	.	.	L	T	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	.	.	P	Q	P	I	L	C	K	D	F	I	I	D	P	Y	Q	I	.	.	.	.	Y
Template Known Secondary structure		T	T			S		S	S											T	T	T		S					.	.	.	.	.	.	.	.	.				S	T	T	T				T	T										.	.		S						S				S					.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																						.	.																	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V	G	I	.	.	.	.	.	K	D	T	I
Query Conservation																																																																									.	.	.	.	.
Alig confidence																		.	.	.																.										.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																		.	.	.																.										.	.	.	.	.	.	.	.
Template Sequence		L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	.	.	.	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	.	L	E	M	G	V	L	T	E	V	.	.	.	.	.	.	.	.	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S
Template Known Secondary structure						T	T		S						T	T	T	.	.	.																.	T	T								.	.	.	.	.	.	.	.		S										T	T		S						S			T	T	T	T
Template Predicted Secondary structure																		.	.	.																.										.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	F	A	N	G	F	L	I	G	S	A
Template Known Secondary structure				T												T	T	S						S												T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions