Job Description P39359 Confidence 85.84% Date Thu Jan 5 11:59:49 GMT 2012 Rank 268 Aligned Residues 147 % Identity 19% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.									.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	.	.	.	.	.	.	.	.	P	S	T	D	E	A	V	K	L	A	Q	H	A
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.																	.	.	.
Template Sequence		K	K	V	F	L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	.	.	.	.	.	.	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	.	.	.	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A
Template Known Secondary structure															T	T		S							.	.	.	.	.	.		S													G	G	.	.	.	G	S	S									B	T	T	B	S	T	T	S													T
Template Predicted Secondary structure																									.	.	.	.	.	.																	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.																				140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																						.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	.	.	.	.	.	P	V	I	L	Y	N	F	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	G	Q	D	L	T	P	E	T	V
Query Conservation																																						.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.																			.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.												.	.	.	.
Template Sequence		.	.	.	G	A	S	I	I	G	V	N	C	H	F	.	.	.	.	D	P	T	I	S	L	K	T	V	K	L	M	K	E	G	L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I
Template Known Secondary structure		.	.	.	T		S						S	S	S	.	.	.	.																			T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S		G	G	G	B
Template Predicted Secondary structure		.	.	.												.	.	.	.
Template SS confidence
					209	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		151	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		T	R	L	A	L	Q	N	.	.	.	.	E	N	I	V	G	I	K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.													.
Template Conservation																									.
Template Sequence		Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y	I	G	G	C	C	G	F	E	P	.	Y	H	I	R	A	I	A	E	E	L	A	P	E	R	G	F
Template Known Secondary structure												T								T	T				.										T					S	S
Template Predicted Secondary structure																									.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions