Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence62.89%DateThu Jan 5 11:59:49 GMT 2012
Rank431Aligned Residues119
% Identity17%Templated1i1wa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution0.89

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGV. . . . . . GSPSTDEAVKLAQHAQAYGA. . DGIVAINPYYWKVAPR
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Template Sequence  SLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGI. GSQTHLSAGQGA
Template Known Secondary structure  SB


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   138.140.........150.........160.........170.........180.........190.........200.... .....210......
 
   116...120.........130.........140.........150.........160...
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Query Sequence  NLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGI
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Template Sequence  SVLQALPLLASAGTPEVAITELDVAGASSTDYVNVVNACLNVSSCVGI
Template Known Secondary structure  TT

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   217..220.........230.........240.........250.........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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