Job Description P39359 Confidence 95.91% Date Thu Jan 5 11:59:49 GMT 2012 Rank 106 Aligned Residues 133 % Identity 14% Template d1gwja_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.2

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	.	.	.	.	E	F	S	Q	M	N	T	A	Q	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	.	.	.	.	.	.
Query Conservation																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.				.	.	.	.	.	.
Template Conservation																																																																								.
Template Sequence		V	E	D	Y	R	Q	A	A	Q	R	A	K	R	A	G	F	D	M	V	E	V	H	A	A	N	A	C	L	P	N	Q	F	L	A	T	G	T	N	R	R	T	D	Q	Y	G	G	S	I	E	N	R	A	R	F	P	L	E	V	V	D	A	V	A	E	V	F	G	P	E	R	.	V	G	I	R	L	T	P	F	L
Template Known Secondary structure															T	T		S								T	T								S	T	T	T					S	T	T	S	S	S					T																G	G	G	.							T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.
						78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	V	G	S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																																									.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		E	L	F	G	L	T	D	D	E	P	E	A	M	A	F	Y	L	A	G	E	L	D	R	R	G	L	A	Y	L	H	F	N	E	P	D	W	I	G	G	D	I	T	Y	P	E	G	F	R	E	Q	M	R	Q	R	F	K	G	G	L	I	.	.	.	.	.	.	.	Y	C	G	N	Y	D	A	G	R	A	Q	A	R
Template Known Secondary structure				T	T				S																	T		S							S		B	T	T	B						T	T											S				.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.	.
		154	.	.	.		.	.	160	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	L	Q	N	.	E	N	I	V	G	I
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	D	D	N	T	A	D	A	V	A	F
Template Known Secondary structure				T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions