Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence74.66%DateThu Jan 5 11:59:49 GMT 2012
Rank342Aligned Residues116
% Identity18%Templated1bg4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GGEFSQMNTAQRMALAEEAVTIVDGRVPVLI. . . . . . GVGSPSTDEAVKLAQHAQAYG. . ADGIVAINPYYWKVAPRNLD
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Template Sequence  NSVFYNVIGEDYVRIAFETARSVDPNAKLYINDYNLDSAGYSKVNGMVSHVKKWLAAGIPIDGIGS. QTHLGAGAGSAVA
Template Known Secondary structure 

T
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GGG
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Query Sequence  DYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGI
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Template Sequence  GALNALASAGTKEIAITELDIAGASSTDYVNVVNACLNQAKCVGI
Template Known Secondary structure  TT

STT

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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