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Job DescriptionP39359
Confidence100.00%DateThu Jan 5 11:59:49 GMT 2012
Rank7Aligned Residues291
% Identity31%Templatec3si9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPS
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Template Sequence  LKGAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNS
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B
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  TDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGI
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Template Sequence  TSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGV
Template Known Secondary structure  TT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  KDTIDSVGHLRTMINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNKKLL
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Template Sequence  KDATGKIERASEQREKC. . . GKDFVQLSGDDCTALGFNAHGGVGCISVSSNVAPKLCAQLHAACLCSDYKTALKLNDLLM
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   166...170.........180.. .......190.........200.........210.........220.........230.........240..
 
   244.....250.........260.........270.........280.........290.........
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Query Sequence  QLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEASEEAKDKVHVLLTAQGIL
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Template Sequence  PLNRAVF. IEPSPAGIKYAAAKLGLC. GTIVRSPIVPLSDTTKKIIDEALYHAGLL
Template Known Secondary structure  TT.SSSTTTTSS.




TTS



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   243...... 250.........260....... ..270.........280.........290......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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