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Job DescriptionP39359
Confidence74.43%DateThu Jan 5 11:59:49 GMT 2012
Rank349Aligned Residues185
% Identity10%Templatec3n0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GIIPPVSSTFHRDGTLDKKAMREVADFLINK. GVDGLFYLGTGGEFSQMNT. AQRMALAEEAVTIVDGRV. . . . . . PVLI
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Template Sequence  KALGQPVKLVSADYQXKTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGI
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   61........70.........80.........90.........100.........110.........120.........130.........140
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  GVGSPSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQN
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Template Sequence  GFLYNFTSIVKTVVQAQLAKGYKTWFLXLPDA. . AYGDLXNAAIRRELTAGGGQIVGSVRFPFETQDFSSY. LLQAKASG
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   141........150.........160.........170.. .......180.........190.........200......... 210.......
 
   158.160.........170.........180.........190...
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Query Sequence  ENIVGIKDTIDSVGHLRTMINTVKSVRPSFSVFCGY
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Template Sequence  AQLIVSTSGGAANINIXKQAREFGLPSKTQKVGGXI
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   218.220.........230.........240.........250...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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