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Job DescriptionP39359
Confidence88.56%DateThu Jan 5 11:59:49 GMT 2012
Rank241Aligned Residues201
% Identity17%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KKFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGS
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Template Sequence  ANTKPLIPVIVID. . . . . . . DLVHAIPXAKALVAGGVHLLEV. . . . . . . . TLRTEAGLAAISAIKKAVPE. . . AIVGAGT
Template Known Secondary structure  TTS
S

S.......
GGGTT

........TTSTT
TT...S
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   910.........20. ........30.........40... ......50.........60... ......70
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  PSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIV
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Template Sequence  VCTAD. . . DFQKAIDAGAQFIVSPG. . . . . . LTPELIEKAKQVKLDGQWQGVFL. . PGV. . . . ATASEVXIAAQAGITQL
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   71.... ....80.........90.. .......100.........110..... ... .120.........130.....
 
   162.......170.........180.... .....190.........200.........210.........220.........230.........240
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Query Sequence  GIKDTIDSVGHLRTMINTVKSVR. PSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNK
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Template Sequence  KC. FPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTESKLLI. . . . . . EGDWNEVTRRAS
Template Known Secondary structure  .TTTTTTTTT
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TTTSTTB

SGGG
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   136. ..140.........150.........160.........170.........180.........190...... ...200........
 
   241.
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Query Sequence  KL
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Template Sequence  EI
Template Known Secondary structure  S
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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