Job Description P39359 Confidence 59.94% Date Thu Jan 5 11:59:49 GMT 2012 Rank 446 Aligned Residues 189 % Identity 16% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.													.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	.	.	.	.	.	.	.	.	.	.	.	.	S	T	D	E	A	V	K
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																				.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																				.	.	.	.	.	.
Template Sequence		D	L	D	L	A	I	A	E	V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	.	.	T	C	R	G	I	G	R	D	P	V	K	L	R	R	I	S	A	E	T	.	.	.	.	.	.	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D
Template Known Secondary structure																T	T								.	.			B	T	T	T														.	.	.	.	.	.									S	B			G	G	G			G	G	G	G	T
Template Predicted Secondary structure																									.	.																				.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.								.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure														.	.	.	.	.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	Q	H	A	Q	A	Y	G	A	D	G	.	.	.	.	.	.	.	I	.	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S	D	F	T	A	E	E	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V
Template Known Secondary structure									T		B	T	T	B	S				S	S								T	T																													T	T	S													T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
								143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.														.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L
Query Conservation		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A	.	Q	R	G	A	F	L	E	F	D	X	I	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y
Template Known Secondary structure						G	G	G	T	T										.			T								T	T						T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G
Template Predicted Secondary structure																				.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	G	A	I	T	A	S	A	N	F	A	P	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	N	G	Y	A	F	V	T	K	H	F	L	P	R	L
Template Known Secondary structure		T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions