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Job Description | P39359 | Confidence | 48.69% | Date | Thu Jan 5 11:59:49 GMT 2012 |
Rank | 500 | Aligned Residues | 87 |
% Identity | 13% | Template | c3js3C_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:3-dehydroquinate dehydratase; |
PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate
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Resolution | 2.20 Å |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
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. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
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Query Sequence |   |
D | G | R | V | P | V | L | I | G | V | G | S | P | S | T | D | E | A | V | K | L | A | Q | H | A | Q | A | Y | G | A | D | G | I | V | A | I | N | P | Y | Y | W | K | V | . |
A | P | R | N | L | D | D | Y | Y | Q | Q | I | A | R | S | V | . |
T | L | P | V | I | L | Y | N | F | P | D | L | T | G | Q | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | G | R | P | K | I | C | V | P | I | I | G | K | N | K | K | D | I | I | K | E | A | K | E | L | K | D | A | C | L | D | I | I | E | W | R | V | D | F | F | E | N | V | E | N | I | K | E | V | K | E | V | L | Y | E | L | R | S | Y | I | H | D | I | P | L | L | F | T | F | R | S | V | V | E | G | G | E | K | L | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
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146 | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | P | E | T | V | T | R | L | A | L | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | R | D | Y | Y | T | T | L | N | K | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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94 | . | . | . | . | . | 100 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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