Job Description P39359 Confidence 100.00% Date Thu Jan 5 11:59:49 GMT 2012 Rank 24 Aligned Residues 289 % Identity 26% Template c3h5dD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae Resolution 1.99 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	S	G	I	I	P	P	V	S	S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	C	K	I	I	T	A	F	I	T	P	F	H	E	D	G	S	I	N	F	D	A	I	P	A	L	I	E	H	L	L	A	H	H	T	D	G	I	L	L	A	G	T	T	A	E	S	P	T	L	T	H	D	E	E	L	E	L	F	A	A	V	Q	K	V	V	N	G	R	V	P	L	I	A	G	V	G	T	N
Template Known Secondary structure		T	T											B		T	T	S	S	B		T	T												T	T							S	S	T	T	T	T	G	G	G	S																S	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	.	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V
Query Conservation																		.
Alig confidence																		.																																																									.
Template Conservation																																																																											.
Template Sequence		D	T	R	D	S	I	E	F	V	K	E	V	A	E	F	G	G	F	A	A	G	L	A	I	V	P	Y	Y	N	K	P	S	Q	E	G	M	Y	Q	H	F	K	A	I	A	D	A	S	D	L	P	I	I	I	Y	N	I	P	G	R	V	V	V	E	L	T	P	E	T	M	L	R	L	A	.	D	H	P	N	I	I
Template Known Secondary structure		S																		S									S	S																	S		S	S												S												T	.	T	S	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F	A	P	E	L	S	V	G	I	Y	R	A	W	R	E	G	D	L	A	T	A	A	T	L	N	K	K
Query Conservation
Alig confidence											.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		G	V	K	E	C	T	S	L	A	.	.	.	.	N	M	A	Y	L	I	E	H	K	P	E	E	F	L	I	Y	T	G	E	D	G	D	A	F	H	A	M	N	L	G	A	D	G	V	I	S	V	A	S	H	T	N	G	D	E	M	H	E	M	F	T	A	I	A	E	S	D	M	K	K	A	A	A	I	Q	R	K
Template Known Secondary structure							S				.	.	.	.											S	S						S		G	G	G								T							S	T																	T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	L	P	A	I	Y	A	L	E	T	P	F	V	S	L	I	K	Y	S	M	Q	C	V	G	L	P	V	E	T	Y	C	L	P	P	I	L	E	A	S	E	E	A	K	D	K	V	H	V	L	L	T	A	Q	G	I
Query Conservation
Alig confidence											.																			.
Template Conservation											.																			.
Template Sequence		F	I	P	K	V	N	A	L	F	.	S	Y	P	S	P	A	P	V	K	A	I	L	N	Y	M	G	F	E	.	A	G	P	T	R	L	P	L	V	P	A	P	E	E	D	V	K	R	I	I	K	V	V	V	D	G	D	Y
Template Known Secondary structure										T	.	S	S	S	T	T										T	T	S		.						T	T																	S
Template Predicted Secondary structure											.																			.
Template SS confidence
		242	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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