Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence53.87%DateThu Jan 5 11:59:49 GMT 2012
Rank482Aligned Residues141
% Identity13%Templatec3gg7A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized metalloprotein; PDBTitle: crystal structure of an uncharacterized metalloprotein from2 deinococcus radiodurans
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80. ........90....
Predicted Secondary structure 




















......

Query SS confidence 




























































. . . . . .












Query Sequence  LDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGS. . . . . . PSTDEAVKLAQHA
Query Conservation 

       
  
   

 

   




   

 


  
             

 

  ...... 

   
  
  
Alig confidence 





























...........



















......












Template Conservation 
               

   
        ...........                                       
Template Sequence  LDLYPDPVAVARACEERQLTVLSVTTTPAA. . . . . . . . . . . WRGTLALAAGRPHVWTALGFHPEVVSERAADLPWFDRYL
Template Known Secondary structure  GGGSSSTT


SSGGG...........GGGTT
TT
B


GGGTTTTGGGTG
Template Predicted Secondary structure 












...........












Template SS confidence 















































































   8.10.........20.........30....... ..40.........50.........60.........70......
 
   95....100......... 110.........120.........130.........140.........150........ .160........
Predicted Secondary structure 








....



















..





Query SS confidence 














. . . .
















































. .









Query Sequence  QAYGADGIVAINPYY. . . . WKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNE. . NIVGIKDTID
Query Conservation     




    
 
....   
   
      

 
   





 
  

  
    
  
    
.. 
 


 
  
Alig confidence 














....





























......












..









Template Conservation        
  
                       

       
  
   ......       

   
    

 
    
Template Sequence  PETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR. . . . . . AESEVLNCLEANPRSGTPILHWYSG
Template Known Secondary structure  GG
S



GGGGGGTT

TT......

GGGT

S
Template Predicted Secondary structure 



















......









Template SS confidence 















































































   77..80.........90.........100.........110.........120..... ....130.........140.........150
 
   169170........
Predicted Secondary structure 
Query SS confidence 









Query Sequence  SVGHLRTMIN
Query Conservation            
Alig confidence 









Template Conservation            
Template Sequence  SVTELRRAIS
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 









   151........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions