Job Description P39359 Confidence 59.10% Date Thu Jan 5 11:59:49 GMT 2012 Rank 450 Aligned Residues 62 % Identity 29% Template c3gdeA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: the closed conformation of atp-dependent dna ligase from2 archaeoglobus fulgidus Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A
Query Conservation
Alig confidence									.	.	.																					.
Template Conservation									.	.	.																					.
Template Sequence		D	I	L	Y	H	D	G	.	.	.	E	C	I	D	L	P	L	R	E	R	R	K	L	L	E	S	A	V	N	E	.	S	E	K	I	K	L	A	K	Q	I	V	T	D	S	V	D	E	V	R	K	M	Y	D	E	A	I	S	A	G	H	E	G	V	M	I
Template Known Secondary structure							S	S	.	.	.	B		T	T	S	B												B			.		S	S										S															T	T
Template Predicted Secondary structure									.	.	.																					.
Template SS confidence
		338	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions