Job Description P39359 Confidence 85.42% Date Thu Jan 5 11:59:49 GMT 2012 Rank 271 Aligned Residues 206 % Identity 18% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	F	S	G	I	I	P	P	V	S	S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G
Query Conservation
Alig confidence					.	.	.	.																																						.	.	.	.	.
Template Conservation					.	.	.	.																																						.	.	.	.	.
Template Sequence		L	K	K	.	.	.	.	I	Q	F	F	D	T	T	L	R	D	G	E	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	.	.	.	.	.	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V
Template Known Secondary structure					.	.	.	.							T	T	T																					T		S						.	.	.	.	.		G	G	G																	S	S								S	S
Template Predicted Secondary structure					.	.	.	.																																						.	.	.	.	.
Template SS confidence
		1	.	.					.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.
Predicted Secondary structure																															.	.	.	.																				.	.																				.	.
Query SS confidence																															.	.	.	.																				.	.																				.	.
Query Sequence		S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	.	.	.	.	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	.	.	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	.	.	E	T	V	T	R
Query Conservation																															.	.	.	.																				.	.																				.	.
Alig confidence																															.	.	.	.																				.	.																				.	.
Template Conservation
Template Sequence		E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T
Template Known Secondary structure													T	T		S	S										S							T	T																				T	T		S								T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.																			.	.	.	.	.										.	.	.	.	.
Query SS confidence																	.	.																			.	.	.	.	.										.	.	.	.	.
Query Sequence		L	A	L	Q	N	E	N	I	V	G	I	K	D	T	I	.	.	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	.	.	.	.	.	S	F	S	V	F	C	G	Y	D	.	.	.	.	.	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F
Query Conservation																	.	.																			.	.	.	.	.										.	.	.	.	.
Alig confidence																	.	.																			.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		A	I	D	A	G	A	T	V	I	N	I	P	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N	G	A	R	R	V	E	G	T	I	N	G	I
Template Known Secondary structure					T	T									S	S	S																			T	T	G	G	G	S							B		T	T	S												T	T							B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions