Job Description P39359 Confidence 100.00% Date Thu Jan 5 11:59:49 GMT 2012 Rank 27 Aligned Residues 287 % Identity 26% Template c3daqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	F	S	G	I	I	P	P	V	S	S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		H	L	F	E	G	V	G	V	A	L	T	T	P	F	T	.	N	N	K	V	N	L	E	A	L	K	A	H	V	N	F	L	L	E	N	N	A	Q	A	I	I	V	N	G	T	T	A	E	S	P	T	L	T	T	D	E	K	E	L	I	L	K	T	V	I	D	L	V	D	K	R	V	P	V	I	A	G	T	G	T
Template Known Secondary structure			S														.	T	T																	T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence		N	D	T	E	K	S	I	Q	A	S	I	Q	A	K	A	L	G	A	D	A	I	M	L	I	T	P	Y	Y	N	K	T	N	Q	R	G	L	V	K	H	F	E	A	I	A	D	A	V	K	L	P	V	V	L	Y	N	V	P	S	R	T	N	M	T	I	E	P	E	T	V	E	I	L	S	.	Q	H	P	Y	I	V
Template Known Secondary structure		S																T		S									S	S																				S												S													.	T	S	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F	A	P	E	L	S	V	G	I	Y	R	A	W	R	E	G	D	L	A	T	A	A	T	L	N	K	K
Query Conservation
Alig confidence																						.	.																																																	.	.
Template Conservation																						.	.																																																	.	.
Template Sequence		A	L	K	D	A	T	N	D	F	E	Y	L	E	E	V	K	K	R	I	D	.	.	T	N	S	F	A	L	Y	S	G	N	D	D	N	V	V	E	Y	Y	Q	R	G	G	Q	G	V	I	S	V	I	A	N	V	I	P	K	E	F	Q	A	L	Y	D	A	Q	Q	S	G	L	.	.	D	I	Q	D	Q	F	K	P
Template Known Secondary structure																		T	T	S		.	.	T	T	T	S					S		G	G	G							T	T							S	G	G	G	T														T	T		.	.
Template Predicted Secondary structure																						.	.																																																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	L	P	A	I	Y	A	L	E	T	P	F	V	S	L	I	K	Y	S	M	Q	C	V	G	L	P	V	E	T	Y	C	L	P	P	I	L	E	A	S	E	E	A	K	D	K	V	H	V	L	L	T	A	Q
Query Conservation
Alig confidence											.																			.
Template Conservation											.																			.
Template Sequence		I	G	T	L	L	S	A	L	S	.	V	D	I	N	P	I	P	I	K	A	L	T	S	Y	L	G	F	G	.	N	Y	E	L	R	L	P	L	V	S	L	E	D	T	D	T	K	V	L	R	E	A	Y	D	T	F
Template Known Secondary structure										T	.	T	S	S	T	T	T	T								T	T	S	S	.		S				T	T
Template Predicted Secondary structure											.																			.
Template SS confidence
		237	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions