Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence100.00%DateThu Jan 5 11:59:49 GMT 2012
Rank30Aligned Residues289
% Identity22%Templatec3d0cB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KKFSGIIPPVSSTF. HRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVG
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Template Sequence  KRFSTISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG
Template Known Secondary structure  GGGSS




B
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TTSGGGTGGGS
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Query Sequence  SPSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENI
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Template Sequence  Y. SVDTAIELGKSAIDSGADCVXIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH. . . . LSDDVIKELA. PLDKL
Template Known Secondary structure  S.STT
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Query Sequence  VGIKDTIDSVGHLRTMINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNK
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Template Sequence  VGIKYAINDIQRVTQVXRAVPKSSNVAFICGTAEKWAPFFYHAGAVGFTSGLVNVFPQKSFALLEALEEGNQEKIWDVWE
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Query Sequence  KLLQLPAIYALE. . TPFVSLIKYSMQCVGLPVETYCLPPILEASEEAKDKVHVLLTAQG
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Template Sequence  DVVPFEDLRAKHNNGNNVVIIKEAXEQLGLR. AGVTREPVNPLSPNDRLELEELLKSWN
Template Known Secondary structure  TTTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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